Plot results of `ProActive()` pattern-matching
Source:R/plotProActiveResults.R
plotProActiveResults.Rd
Plot read coverage of contigs/chunks with detected gaps and elevations and their associated pattern-match.
Arguments
- pileup
A .txt file containing mapped sequencing read coverages averaged over 100 bp windows/bins.
- ProActiveResults
The output from `ProActive()`.
- elevFilter
Optional, only plot results with pattern-matches that achieved an elevation ratio (max/min) greater than the specified values. Default is no filter.
- saveFilesTo
Optional, Provide a path to the directory you wish to save output to. A folder will be made within the provided directory to store results.